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a The origin is at the carbonyl carbon. The z axis is along the carbonyl bond with O in positive direction. The x-axis is in-plane and directed such that the N has a positive x coordinate.b Monopole positions relative to the atomic centers (R. W. Woody, J. Chem. Phys. 49, 4797-4806 (1968)).
cMonopole charges in 10-10 esu. Transition moments for secondary amide group in N-acetylglycine (L. B. Clark, J. Am. Chem. Soc., 117, 7974-7806 (1968)).
d These are the ground-state permanent monopoles for secondary amide groups (R. W. Woody and I. Tinoco, Jr., J. Chem. Phys. 47, 4927-4945 (1967)). For tertiary (Pro) amides, the p monopoles are the same, but the two in-plane s monopoles are set to zero.
Transition Parameters for pp* Transitions in the Amide Groupa
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a Because of the plane of symmetry, the y-component of the Ñ matrix element and the x, z components of the (r x Ñ) matrix element are zero.b See footnote c in previous Table.
Monopoles for np* Transitions in Amidesa
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a The z axis is along the carbonyl bond with O positive. The x-axis is in-plane and directed such that the N has a positive x coordinate. The origin is at the carbonyl carbon.b Monopole positions relative to the atomic centers (R. W. Woody, J. Chem. Phys. 49, 4797-4806 (1968)).
c Monopole charges in 10-10 esu. Calculated from INDO/S (J. Ridley and M. Zerner, Theor. Chim. Acta 32, 111-134 (1973)) wave functions for N-methylacetamide.
Transition Parameters for the np* Transition in the Amide Groupa
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a Because of the plane of symmetry, the x and z components of the Ñ matrix element and the y component of the (r x Ñ) matrix element are zero.b Corresponds to the standard wavelength for the np* transition in polypeptides, 220 nm. Note that INDO/S (J. Ridley and M. Zerner, Theor. Chim. Acta 32, 111-134 (1973)) significantly underestimates the np* transition energy, placing the transition at about 300 nm.
c Calculated from INDO/S (J. Ridley and M. Zerner, Theor. Chim. Acta 32, 111-134 (1973)) wave functions for N-methylacetamide.