| Contact | Areas of interest | |
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Andre Ptitsyn, Ph.D. email: Andrey.Ptitsyn at colostate.edu Phone: (970)-491-0878 CSU Center for bioinformatics: http://www.bioinformatics.colostate.edu Carriculum Vitae |
High-performance computing, sequence analysis, functional genomics, gene expression analysis and interpretation, pattern analysis, periodic processes in biology, software for biogical research |
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| Supporting materials for meta-analysis of gene expression in metabolic syndrome (Ptitsyn A, Hulver M, Cefalu W, York D, Smith SR. Unsupervised clustering of gene expression data points at hypoxia as possible trigger for metabolic syndrome. BMC Genomics 2006, 7:318 ): | ||
| Table 1 | ||
| Table 2 | ||
| Table 3 | ||
| Table 4 | ||
| Table 5 | ||
| Supporting figures | ||
| FOREL clustering program | ||
| Supporting materials for circadian studies | ||
| Supporting materials for CLU (Ptitsyn, A. Hide W. CLU: a new algorithm for EST clustering, BMC Bioinformatics. 2005 Jul 15;6 Suppl. 2:S3.) | |
| CLU for IBM PW3 | Source files |
| CLU for Linux/Intel/GCC | Source files |
| CLU for SGI/GCC | Source files |
| CLU for SGI/SGI compiler | Source files |
| CLU for Win32/Borland | Source files |
| test set | 10,000 ESTs |